Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | DWW04_03015 | Not Available | + | 668319 - 670466 | 81953.4 |
| serine acetyltransferase | DWW04_03020 | Not Available | + | 670767 - 671675 | 32799.2 |
| type ii toxin-antitoxin system hicb family antitoxin | DWW04_03025 | Not Available | + | 671826 - 672017 | 7388.35 |
| rna methyltransferase | DWW04_03030 | Not Available | + | 672529 - 673977 | 56204.3 |
| s9 family peptidase | DWW04_03035 | Not Available | + | 673984 - 676197 | 83577.3 |
| phosphoribosylamine--glycine ligase | DWW04_03040 | Not Available | + | 676213 - 677481 | 45595.0 |
| hypothetical protein | DWW04_03045 | Not Available | + | 677500 - 678435 | 35910.8 |
| deda family protein | DWW04_03050 | Not Available | + | 678411 - 678878 | 17015.3 |
| sam-dependent methyltransferase | DWW04_03055 | Not Available | + | 678883 - 679566 | 26033.9 |
| hypothetical protein | DWW04_03060 | Not Available | - | 679919 - 682927 | 110596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
