Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | DWW04_02965 | Not Available | - | 653739 - 654365 | 23847.5 |
| arginine--trna ligase | DWW04_02970 | Not Available | - | 654366 - 656186 | 68001.7 |
| tonb-dependent receptor | DWW04_02975 | Not Available | + | 656794 - 659880 | 114202.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_02980 | Not Available | + | 659896 - 661446 | 58698.7 |
| u32 family peptidase | DWW04_02985 | Not Available | - | 661735 - 662997 | 47014.9 |
| trna dihydrouridine synthase dusb | DWW04_02990 | Not Available | + | 663148 - 664137 | 37154.4 |
| duf2807 domain-containing protein | DWW04_02995 | Not Available | - | 664233 - 665084 | 29119.1 |
| phosphatase pap2 family protein | DWW04_03000 | Not Available | - | 665261 - 666238 | 37786.7 |
| nad(p)-dependent oxidoreductase | DWW04_03005 | Not Available | - | 666229 - 667275 | 40078.3 |
| cation transporter | DWW04_03010 | Not Available | - | 667286 - 668188 | 32965.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
