Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | DWW04_02555 | Not Available | - | 554045 - 555172 | 42154.6 |
| mfs transporter | DWW04_02560 | Not Available | - | 555212 - 556705 | 54512.9 |
| glycoside hydrolase family 16 protein | DWW04_02565 | Not Available | - | 557033 - 557824 | 30536.4 |
| phosphoglucosamine mutase | DWW04_02570 | Not Available | - | 557916 - 559304 | 50489.7 |
| duf4827 domain-containing protein | DWW04_02575 | Not Available | - | 559301 - 559936 | 24065.5 |
| bifunctional oligoribonuclease/pap phosphatase nrna | DWW04_02580 | Not Available | - | 560019 - 561059 | 39364.3 |
| comec family competence protein | DWW04_02585 | Not Available | - | 561109 - 563028 | 72716.6 |
| ribulose-phosphate 3-epimerase | DWW04_02590 | Not Available | - | 563075 - 563728 | 23985.5 |
| porin family protein | DWW04_02595 | Not Available | - | 563804 - 565099 | 48197.7 |
| sigma-70 family rna polymerase sigma factor | DWW04_02600 | Not Available | - | 565102 - 565644 | 20869.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
