Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucuronidase | DWW04_02505 | Not Available | - | 534626 - 536671 | 77282.5 |
| glycosyhydrolase | DWW04_02510 | Not Available | - | 536668 - 539262 | 99374.7 |
| glycoside hydrolase | DWW04_02515 | Not Available | - | 539275 - 540858 | 60299.7 |
| hypothetical protein | DWW04_02520 | Not Available | + | 541021 - 541212 | 7019.79 |
| hybrid sensor histidine kinase/response regulator | DWW04_02525 | Not Available | + | 541234 - 545286 | 154755.0 |
| hypothetical protein | DWW04_02530 | Not Available | - | 545723 - 545908 | 7382.18 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_02535 | Not Available | - | 545913 - 547847 | 71559.0 |
| tonb-dependent receptor | DWW04_02540 | Not Available | - | 547862 - 550933 | 113088.0 |
| glycoside hydrolase family 43 protein | DWW04_02545 | Not Available | - | 550975 - 552711 | 64643.5 |
| alpha-n-arabinofuranosidase | DWW04_02550 | Not Available | - | 553061 - 554032 | 36816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
