Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zeta toxin family protein | E1J06_24475 | Not Available | + | 5712761 - 5713627 | 32771.8 |
| m23 family metallopeptidase | E1J06_24480 | Not Available | - | 5713677 - 5714342 | 25158.4 |
| duf4099 domain-containing protein | E1J06_24485 | Not Available | + | 5714323 - 5715102 | 30041.5 |
| duf3945 domain-containing protein | E1J06_24490 | Not Available | + | 5715104 - 5716663 | 58871.6 |
| duf3991 domain-containing protein | E1J06_24495 | Not Available | + | 5716668 - 5717777 | 42741.0 |
| hypothetical protein | E1J06_24500 | Not Available | + | 5717774 - 5718277 | 20038.8 |
| plasmid transfer protein | E1J06_24505 | Not Available | + | 5718258 - 5718965 | 26606.8 |
| dna topoisomerase i | E1J06_24510 | Not Available | + | 5718966 - 5719802 | 31691.2 |
| hypothetical protein | E1J06_24515 | Not Available | + | 5719799 - 5720152 | 13934.3 |
| hypothetical protein | E1J06_24525 | Not Available | + | 5720432 - 5720704 | 10359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
