Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | E1J06_23685 | Not Available | - | 5596886 - 5598268 | 52602.8 |
| alkaline phosphatase | E1J06_23690 | Not Available | - | 5598448 - 5599344 | 33233.2 |
| pyrroline-5-carboxylate reductase | E1J06_23695 | Not Available | - | 5599616 - 5600389 | 27215.3 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | E1J06_23700 | Not Available | - | 5600574 - 5601698 | 40952.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | E1J06_23705 | Not Available | - | 5601712 - 5602680 | 36000.4 |
| argininosuccinate synthase | E1J06_23710 | Not Available | - | 5602686 - 5603894 | 45126.7 |
| n-acetyltransferase | E1J06_23715 | Not Available | - | 5603996 - 5604553 | 20628.9 |
| arginine repressor | E1J06_23720 | Not Available | - | 5604577 - 5605053 | 17501.2 |
| l-rhamnose isomerase | E1J06_23730 | Not Available | + | 5606877 - 5608133 | 47536.4 |
| rhamnulose-1-phosphate aldolase | E1J06_23740 | Not Available | + | 5609332 - 5610141 | 30228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
