Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_23635 | Not Available | + | 5582064 - 5583923 | 70276.5 |
| aaa family atpase | E1J06_23640 | Not Available | + | 5584250 - 5585443 | 45823.4 |
| susc/raga family tonb-linked outer membrane protein | E1J06_23645 | Not Available | + | 5585637 - 5588792 | 114933.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_23650 | Not Available | + | 5588814 - 5590784 | 74039.3 |
| hypothetical protein | E1J06_23655 | Not Available | - | 5591096 - 5591560 | 17313.7 |
| acetyl-coa synthetase | E1J06_23660 | Not Available | - | 5591605 - 5593257 | 62328.4 |
| cupin domain-containing protein | E1J06_23665 | Not Available | - | 5593342 - 5593896 | 20504.8 |
| pyridoxamine 5'-phosphate oxidase family protein | E1J06_23670 | Not Available | + | 5594143 - 5594634 | 18963.9 |
| duf1893 domain-containing protein | E1J06_23675 | Not Available | - | 5594895 - 5595311 | 15826.4 |
| 4fe-4s dicluster domain-containing protein | E1J06_23680 | Not Available | - | 5595324 - 5596850 | 55792.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
