Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_23535 | Not Available | + | 5542968 - 5543159 | 7650.37 |
| susc/raga family tonb-linked outer membrane protein | E1J06_23555 | Not Available | - | 5550900 - 5554310 | 124833.0 |
| aaa family atpase | E1J06_23560 | Not Available | - | 5554503 - 5555696 | 45823.4 |
| hypothetical protein | E1J06_23575 | Not Available | - | 5561694 - 5562089 | 15138.7 |
| glpgli family protein | E1J06_23580 | Not Available | - | 5562101 - 5563807 | 63974.9 |
| dna-binding protein | E1J06_23585 | Not Available | - | 5563886 - 5564524 | 24248.7 |
| hypothetical protein | E1J06_23590 | Not Available | + | 5564526 - 5564732 | 7990.83 |
| virulence-associated protein e | E1J06_23595 | Not Available | + | 5564837 - 5565988 | 45217.5 |
| susc/raga family tonb-linked outer membrane protein | E1J06_23600 | Not Available | + | 5566323 - 5569733 | 124833.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_23615 | Not Available | + | 5575299 - 5577254 | 73688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
