Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | E1J06_23415 | Not Available | - | 5506755 - 5508233 | 54826.7 |
| arginine repressor | E1J06_23420 | Not Available | + | 5508540 - 5509016 | 17501.2 |
| n-acetyltransferase | E1J06_23425 | Not Available | + | 5509040 - 5509597 | 20628.9 |
| argininosuccinate synthase | E1J06_23430 | Not Available | + | 5509698 - 5510906 | 45126.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | E1J06_23435 | Not Available | + | 5510912 - 5511880 | 36000.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | E1J06_23440 | Not Available | + | 5511894 - 5513018 | 40952.7 |
| pyrroline-5-carboxylate reductase | E1J06_23445 | Not Available | + | 5513203 - 5513976 | 27215.3 |
| alkaline phosphatase | E1J06_23450 | Not Available | + | 5514248 - 5515144 | 33233.2 |
| aldo/keto reductase | E1J06_23455 | Not Available | + | 5515324 - 5516706 | 52602.8 |
| 4fe-4s dicluster domain-containing protein | E1J06_23460 | Not Available | + | 5516742 - 5518268 | 55792.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
