Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | E1J06_23365 | Not Available | - | 5489735 - 5490733 | 37374.8 |
| arac family transcriptional regulator | E1J06_23370 | Not Available | - | 5490741 - 5491661 | 35152.7 |
| response regulator | E1J06_23375 | Not Available | + | 5491809 - 5495969 | 158149.0 |
| tonb-dependent receptor | E1J06_23380 | Not Available | + | 5496110 - 5499181 | 114382.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_23385 | Not Available | + | 5499193 - 5500812 | 60088.5 |
| right-handed parallel beta-helix repeat-containing protein | E1J06_23390 | Not Available | + | 5500980 - 5502494 | 55855.1 |
| duf4251 domain-containing protein | E1J06_23395 | Not Available | - | 5502595 - 5503092 | 18505.0 |
| rhamnulose-1-phosphate aldolase | E1J06_23400 | Not Available | - | 5503451 - 5504260 | 30228.7 |
| l-rhamnose/proton symporter rhat | E1J06_23405 | Not Available | - | 5504346 - 5505365 | 35982.0 |
| l-rhamnose isomerase | E1J06_23410 | Not Available | - | 5505459 - 5506715 | 47536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
