Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_23260 | Not Available | + | 5462429 - 5462680 | 9922.02 |
| susc/raga family tonb-linked outer membrane protein | E1J06_23265 | Not Available | + | 5462707 - 5466108 | 125004.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_23270 | Not Available | + | 5466132 - 5467904 | 66936.9 |
| endonuclease/exonuclease/phosphatase family protein | E1J06_23275 | Not Available | + | 5467948 - 5468793 | 31990.9 |
| glycoside hydrolase family 97 protein | E1J06_23285 | Not Available | + | 5470117 - 5472132 | 75776.0 |
| mfs transporter | E1J06_23290 | Not Available | + | 5472256 - 5473554 | 48092.9 |
| glycosidase | E1J06_23295 | Not Available | + | 5473587 - 5474588 | 37660.7 |
| hypothetical protein | E1J06_23300 | Not Available | - | 5474892 - 5475179 | 11261.5 |
| flavodoxin family protein | E1J06_23305 | Not Available | - | 5475179 - 5475736 | 20932.2 |
| sdr family oxidoreductase | E1J06_23310 | Not Available | - | 5475763 - 5476512 | 26426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
