Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 9-o-acetylesterase | E1J06_22810 | Not Available | + | 5373401 - 5375371 | 73526.8 |
| arac family transcriptional regulator | E1J06_22815 | Not Available | - | 5375384 - 5376280 | 34684.5 |
| alpha-galactosidase | E1J06_22820 | Not Available | + | 5376468 - 5378624 | 82529.3 |
| glycosyl hydrolase 43 family protein | E1J06_22825 | Not Available | + | 5378720 - 5380261 | 58481.5 |
| rna polymerase sigma-70 factor | E1J06_22830 | Not Available | + | 5380711 - 5381301 | 23445.2 |
| duf4974 domain-containing protein | E1J06_22835 | Not Available | + | 5381362 - 5382360 | 38169.5 |
| susc/raga family tonb-linked outer membrane protein | E1J06_22840 | Not Available | + | 5382516 - 5385803 | 121627.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_22845 | Not Available | + | 5385833 - 5387275 | 53661.4 |
| s9 family peptidase | E1J06_22850 | Not Available | + | 5387309 - 5388346 | 39560.7 |
| xre family transcriptional regulator | E1J06_22860 | Not Available | - | 5388947 - 5389303 | 13395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
