Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 95 protein | E1J06_22760 | Not Available | + | 5348796 - 5351198 | 89015.5 |
| mfs transporter | E1J06_22765 | Not Available | + | 5351386 - 5352780 | 50829.4 |
| duf5107 domain-containing protein | E1J06_22770 | Not Available | + | 5352792 - 5356133 | 128474.0 |
| glycoside hydrolase family 97 protein | E1J06_22775 | Not Available | + | 5356130 - 5358118 | 75397.2 |
| hybrid sensor histidine kinase/response regulator | E1J06_22780 | Not Available | + | 5358200 - 5362231 | 154666.0 |
| alpha-galactosidase | E1J06_22785 | Not Available | + | 5362439 - 5364466 | 76416.5 |
| tonb-dependent receptor | E1J06_22790 | Not Available | + | 5364506 - 5367559 | 113278.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_22795 | Not Available | + | 5367605 - 5369224 | 62013.7 |
| galactose mutarotase | E1J06_22800 | Not Available | + | 5369314 - 5370336 | 38734.6 |
| beta-mannosidase | E1J06_22805 | Not Available | + | 5370366 - 5373308 | 111224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
