Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l1 | E1J06_22460 | Not Available | + | 5297044 - 5297742 | 24921.5 |
| 50s ribosomal protein l10 | E1J06_22465 | Not Available | + | 5297758 - 5298276 | 18722.8 |
| 50s ribosomal protein l7/l12 | E1J06_22470 | Not Available | + | 5298323 - 5298697 | 12654.2 |
| dna-directed rna polymerase subunit beta | E1J06_22475 | Not Available | + | 5298800 - 5302612 | 142507.0 |
| dna-directed rna polymerase subunit beta' | E1J06_22480 | Not Available | + | 5302651 - 5306937 | 158832.0 |
| duf3467 domain-containing protein | E1J06_22485 | Not Available | + | 5307147 - 5307488 | 12561.0 |
| 30s ribosomal protein s12 | E1J06_22490 | Not Available | + | 5307678 - 5308091 | 14994.4 |
| 30s ribosomal protein s7 | E1J06_22495 | Not Available | + | 5308242 - 5308718 | 18220.1 |
| elongation factor g | E1J06_22500 | Not Available | + | 5308750 - 5310867 | 77490.6 |
| 30s ribosomal protein s10 | E1J06_22505 | Not Available | + | 5310950 - 5311255 | 11419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
