Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenosine kinase | E1J06_22355 | Not Available | + | 5280974 - 5281960 | 35353.0 |
| pdz domain-containing protein | E1J06_22360 | Not Available | + | 5282004 - 5283698 | 63116.7 |
| hypothetical protein | E1J06_22365 | Not Available | - | 5283764 - 5286061 | 87661.0 |
| hamp domain-containing histidine kinase | E1J06_22370 | Not Available | + | 5286183 - 5287568 | 53539.9 |
| response regulator transcription factor | E1J06_22375 | Not Available | + | 5287594 - 5288295 | 26452.2 |
| porin family protein | E1J06_22385 | Not Available | - | 5289417 - 5289908 | 18089.7 |
| gamma carbonic anhydrase family protein | E1J06_22390 | Not Available | - | 5289954 - 5290478 | 18504.4 |
| aminopeptidase p family protein | E1J06_22395 | Not Available | - | 5290488 - 5292269 | 66735.9 |
| 30s ribosomal protein s21 | E1J06_22400 | Not Available | + | 5292438 - 5292629 | 7526.36 |
| recombinase | E1J06_22405 | Not Available | + | 5292707 - 5293588 | 33862.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
