Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | E1J06_22305 | Not Available | - | 5263454 - 5264866 | 52287.3 |
| glycoside hydrolase family 92 protein | E1J06_22310 | Not Available | - | 5264892 - 5267225 | 88777.3 |
| glycerophosphodiester phosphodiesterase family protein | E1J06_22315 | Not Available | - | 5267245 - 5268057 | 30925.9 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_22320 | Not Available | - | 5268131 - 5269771 | 61747.3 |
| tonb-dependent receptor | E1J06_22325 | Not Available | - | 5269792 - 5272815 | 111901.0 |
| duf1624 domain-containing protein | E1J06_22330 | Not Available | - | 5272891 - 5274009 | 41603.0 |
| alpha-n-acetylglucosaminidase | E1J06_22335 | Not Available | - | 5274017 - 5276281 | 87283.1 |
| hybrid sensor histidine kinase/response regulator | E1J06_22340 | Not Available | - | 5276364 - 5280584 | 162752.0 |
| Trna-asn | Not Available | Not Available | + | 5280722 - 5280795 | Not Available |
| Trna-asn | Not Available | Not Available | + | 5280820 - 5280893 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
