Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E1J06_22205 | Not Available | + | 5225590 - 5228916 | 123092.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_22210 | Not Available | + | 5228939 - 5230636 | 64042.9 |
| hypothetical protein | E1J06_22215 | Not Available | + | 5230734 - 5233316 | 98578.5 |
| beta-galactosidase | E1J06_22220 | Not Available | + | 5233332 - 5236172 | 108458.0 |
| tonb-dependent receptor | E1J06_22225 | Not Available | + | 5236339 - 5238726 | 89674.4 |
| duf4374 domain-containing protein | E1J06_22230 | Not Available | + | 5238781 - 5240181 | 51073.7 |
| pepsy domain-containing protein | E1J06_22235 | Not Available | + | 5240198 - 5241394 | 45538.7 |
| magnesium transporter cora family protein | E1J06_22240 | Not Available | - | 5241497 - 5242420 | 35626.5 |
| hypothetical protein | E1J06_22245 | Not Available | + | 5242471 - 5242716 | 9412.92 |
| phosphopyruvate hydratase | E1J06_22250 | Not Available | - | 5242709 - 5243989 | 46033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
