Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J06_22155 | Not Available | + | 5205549 - 5207165 | 60161.9 |
| glycoside hydrolase family 2 | E1J06_22160 | Not Available | + | 5207268 - 5209895 | 100304.0 |
| hypothetical protein | E1J06_22165 | Not Available | + | 5210021 - 5212090 | 78402.5 |
| beta-xylosidase | E1J06_22170 | Not Available | + | 5212103 - 5213647 | 57695.0 |
| glycosyl hydrolase | E1J06_22175 | Not Available | + | 5213674 - 5216067 | 91548.7 |
| glycoside hydrolase family 127 protein | E1J06_22180 | Not Available | + | 5216094 - 5218505 | 90019.6 |
| glycoside hydrolase | E1J06_22185 | Not Available | + | 5218510 - 5219508 | 37749.0 |
| hypothetical protein | E1J06_22190 | Not Available | + | 5219511 - 5221937 | 92701.2 |
| hypothetical protein | E1J06_22195 | Not Available | + | 5222018 - 5222257 | 9308.07 |
| helix-turn-helix domain-containing protein | E1J06_22200 | Not Available | + | 5222558 - 5225437 | 110792.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
