Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | E1J06_22000 | Not Available | - | 5174296 - 5175222 | 35676.5 |
| type ii 3-dehydroquinate dehydratase | E1J06_22005 | Not Available | + | 5175289 - 5175711 | 15728.1 |
| pyruvate kinase | E1J06_22010 | Not Available | + | 5175744 - 5177207 | 54241.6 |
| methyltransferase | E1J06_22015 | Not Available | + | 5177223 - 5177861 | 24385.6 |
| 30s ribosome-binding factor rbfa | E1J06_22020 | Not Available | + | 5177935 - 5178270 | 12972.9 |
| abc transporter permease | E1J06_22025 | Not Available | + | 5178280 - 5179518 | 45814.1 |
| hypothetical protein | E1J06_22030 | Not Available | - | 5179656 - 5179862 | 8446.31 |
| pyridoxamine kinase | E1J06_22035 | Not Available | - | 5179903 - 5180775 | 32827.6 |
| glutamate racemase | E1J06_22040 | Not Available | - | 5180832 - 5181677 | 31296.9 |
| omph family outer membrane protein | E1J06_22045 | Not Available | - | 5181780 - 5182283 | 19288.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
