Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | E1J06_21725 | Not Available | - | 5121969 - 5123231 | 47725.6 |
| glycosyltransferase | E1J06_21730 | Not Available | - | 5123244 - 5124359 | 42805.2 |
| hemolysin activation protein | E1J06_21735 | Not Available | - | 5124332 - 5125348 | 40484.6 |
| licd family protein | E1J06_21740 | Not Available | - | 5125345 - 5126160 | 31469.0 |
| sdr family nad(p)-dependent oxidoreductase | E1J06_21745 | Not Available | - | 5126157 - 5127524 | 50873.3 |
| glycosyl transferase | E1J06_21750 | Not Available | + | 5127616 - 5128446 | 31943.4 |
| acyltransferase | E1J06_21755 | Not Available | - | 5128469 - 5129494 | 39467.3 |
| lipopolysaccharide biosynthesis protein | E1J06_21760 | Not Available | - | 5129494 - 5130930 | 53494.3 |
| methionine--trna ligase | E1J06_21765 | Not Available | - | 5131012 - 5133054 | 77813.0 |
| hypothetical protein | E1J06_21770 | Not Available | - | 5133185 - 5133373 | 7393.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
