Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_21675 | Not Available | + | 5111412 - 5112527 | 40905.4 |
| duf4906 domain-containing protein | E1J06_21680 | Not Available | + | 5112547 - 5115393 | 105944.0 |
| hypothetical protein | E1J06_21685 | Not Available | + | 5115395 - 5115688 | 11380.7 |
| hypothetical protein | E1J06_21690 | Not Available | + | 5115688 - 5115975 | 11347.4 |
| duf5106 domain-containing protein | E1J06_21695 | Not Available | + | 5116048 - 5116983 | 36061.6 |
| 30s ribosomal protein s15 | E1J06_21700 | Not Available | + | 5117062 - 5117331 | 10364.5 |
| s-ribosylhomocysteine lyase | E1J06_21705 | Not Available | - | 5117434 - 5117919 | 18548.4 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | E1J06_21710 | Not Available | - | 5117931 - 5118626 | 25492.4 |
| hypothetical protein | E1J06_21715 | Not Available | + | 5118711 - 5121203 | 93110.6 |
| glycosyltransferase | E1J06_21720 | Not Available | - | 5121230 - 5121976 | 28664.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
