Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | E1J06_21195 | Not Available | - | 5021006 - 5021278 | 9278.29 |
| rhomboid family intramembrane serine protease | E1J06_21200 | Not Available | + | 5021489 - 5022166 | 25391.6 |
| rhomboid family intramembrane serine protease | E1J06_21205 | Not Available | + | 5022147 - 5023040 | 33946.6 |
| endonuclease | E1J06_21210 | Not Available | + | 5023044 - 5024123 | 40431.1 |
| m3 family peptidase | E1J06_21215 | Not Available | + | 5024150 - 5026237 | 78978.4 |
| protein translocase subunit secdf | E1J06_21220 | Not Available | + | 5026416 - 5029403 | 109218.0 |
| sugar kinase | E1J06_21225 | Not Available | - | 5029650 - 5030714 | 38921.4 |
| nad-dependent epimerase/dehydratase family protein | E1J06_21230 | Not Available | - | 5030858 - 5031811 | 35313.3 |
| glycine c-acetyltransferase | E1J06_21235 | Not Available | + | 5031982 - 5033172 | 43601.5 |
| hypothetical protein | E1J06_21240 | Not Available | - | 5033539 - 5034138 | 22852.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
