Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J06_21145 | Not Available | - | 4997473 - 4999224 | 66204.8 |
| tonb-dependent receptor | E1J06_21150 | Not Available | - | 4999244 - 5002453 | 119134.0 |
| glycoside hydrolase family 97 protein | E1J06_21155 | Not Available | - | 5002883 - 5004811 | 73040.6 |
| hybrid sensor histidine kinase/response regulator | E1J06_21160 | Not Available | - | 5004944 - 5009170 | 161518.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | E1J06_21165 | Not Available | + | 5009440 - 5010975 | 57628.1 |
| alpha-l-arabinofuranosidase | E1J06_21170 | Not Available | + | 5010999 - 5012978 | 75410.3 |
| arylsulfatase | E1J06_21175 | Not Available | - | 5013781 - 5015343 | 57635.3 |
| trna 2-thiouridine(34) synthase mnma | E1J06_21180 | Not Available | - | 5015491 - 5016546 | 39978.6 |
| dna-binding protein | E1J06_21185 | Not Available | - | 5016549 - 5017412 | 33055.8 |
| duf4981 domain-containing protein | E1J06_21190 | Not Available | - | 5017584 - 5020913 | 126103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
