Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | E1J06_21095 | Not Available | - | 4985435 - 4985872 | 16529.3 |
| methyltransferase domain-containing protein | E1J06_21100 | Not Available | - | 4985869 - 4986939 | 40434.5 |
| acyltransferase | E1J06_21105 | Not Available | - | 4986955 - 4987839 | 34407.8 |
| acyl carrier protein | E1J06_21110 | Not Available | - | 4987839 - 4988090 | 9579.46 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | E1J06_21115 | Not Available | - | 4988112 - 4989341 | 44135.6 |
| 3-oxoacyl-acp reductase fabg | E1J06_21120 | Not Available | - | 4989349 - 4990077 | 26354.8 |
| aromatic amino acid lyase | E1J06_21125 | Not Available | - | 4990074 - 4991645 | 58946.3 |
| cysteine--trna ligase | E1J06_21130 | Not Available | - | 4991835 - 4993316 | 56320.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | E1J06_21135 | Not Available | - | 4993707 - 4995590 | 70425.4 |
| hypothetical protein | E1J06_21140 | Not Available | - | 4995670 - 4997448 | 64714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
