Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf229 domain-containing protein | E1J06_20945 | Not Available | - | 4942996 - 4944432 | 55014.7 |
| hypothetical protein | E1J06_20950 | Not Available | - | 4944577 - 4945380 | 30500.9 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20955 | Not Available | - | 4945638 - 4947686 | 77383.9 |
| tonb-dependent receptor | E1J06_20960 | Not Available | - | 4947699 - 4950866 | 118082.0 |
| hybrid sensor histidine kinase/response regulator | E1J06_20965 | Not Available | + | 4951050 - 4955123 | 154803.0 |
| 6-phosphofructokinase | E1J06_20970 | Not Available | - | 4955133 - 4956143 | 35805.2 |
| gh3 auxin-responsive promoter family protein | E1J06_20975 | Not Available | + | 4956291 - 4957796 | 57424.9 |
| hypothetical protein | E1J06_20980 | Not Available | + | 4957801 - 4959723 | 73365.3 |
| duf3108 domain-containing protein | E1J06_20985 | Not Available | + | 4959720 - 4960529 | 31328.0 |
| hypothetical protein | E1J06_20990 | Not Available | - | 4960618 - 4961439 | 30770.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
