Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase pdxb | E1J06_20845 | Not Available | + | 4915550 - 4916575 | 38323.9 |
| duf4249 domain-containing protein | E1J06_20850 | Not Available | - | 4916742 - 4917707 | 36369.2 |
| tonb-dependent receptor | E1J06_20855 | Not Available | - | 4917714 - 4920368 | 100790.0 |
| fecr family protein | E1J06_20860 | Not Available | - | 4920365 - 4921168 | 30898.8 |
| rna polymerase sigma-70 factor | E1J06_20865 | Not Available | - | 4921238 - 4921747 | 19927.8 |
| hypothetical protein | E1J06_20870 | Not Available | - | 4922635 - 4924344 | 62932.2 |
| fimbrillin family protein | E1J06_20875 | Not Available | - | 4924371 - 4925354 | 35475.5 |
| hypothetical protein | E1J06_20880 | Not Available | - | 4925438 - 4926664 | 45138.6 |
| duf5119 domain-containing protein | E1J06_20885 | Not Available | - | 4926716 - 4927642 | 34070.0 |
| duf3575 domain-containing protein | E1J06_20890 | Not Available | - | 4927639 - 4928505 | 32940.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
