Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | E1J06_20695 | Not Available | + | 4878642 - 4879544 | 33017.5 |
| nad(p)-dependent oxidoreductase | E1J06_20700 | Not Available | + | 4879555 - 4880601 | 40230.5 |
| phosphatase pap2 family protein | E1J06_20705 | Not Available | + | 4880592 - 4881569 | 37776.6 |
| duf2807 domain-containing protein | E1J06_20710 | Not Available | + | 4881746 - 4882597 | 29169.3 |
| trna dihydrouridine synthase dusb | E1J06_20715 | Not Available | - | 4882693 - 4883682 | 37185.5 |
| u32 family peptidase | E1J06_20720 | Not Available | + | 4883833 - 4885095 | 46984.9 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20725 | Not Available | - | 4885246 - 4886796 | 58666.8 |
| tonb-dependent receptor | E1J06_20730 | Not Available | - | 4886812 - 4889898 | 114122.0 |
| arginine--trna ligase | E1J06_20735 | Not Available | + | 4890592 - 4892412 | 68029.7 |
| ribonuclease h | E1J06_20740 | Not Available | + | 4892413 - 4893039 | 23900.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
