Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | E1J06_20595 | Not Available | + | 4852970 - 4854328 | 50939.3 |
| polysaccharide deacetylase family protein | E1J06_20600 | Not Available | - | 4854352 - 4854963 | 24599.9 |
| duf2723 domain-containing protein | E1J06_20605 | Not Available | - | 4855034 - 4858438 | 129214.0 |
| metal abc transporter atp-binding protein | E1J06_20610 | Not Available | - | 4858899 - 4859666 | 28729.8 |
| zinc abc transporter substrate-binding protein | E1J06_20615 | Not Available | - | 4859676 - 4860581 | 34172.8 |
| arac family transcriptional regulator | E1J06_20620 | Not Available | + | 4861256 - 4861753 | 19042.2 |
| hypothetical protein | E1J06_20625 | Not Available | + | 4861811 - 4864816 | 110653.0 |
| sam-dependent methyltransferase | E1J06_20630 | Not Available | - | 4865169 - 4865852 | 25930.8 |
| deda family protein | E1J06_20635 | Not Available | - | 4865857 - 4866324 | 16985.3 |
| hypothetical protein | E1J06_20640 | Not Available | - | 4866300 - 4867235 | 35960.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
