Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orf6n domain-containing protein | E1J06_20545 | Not Available | + | 4838852 - 4839412 | 21549.0 |
| hypothetical protein | E1J06_20550 | Not Available | + | 4839488 - 4839898 | 15446.6 |
| dihydrolipoyl dehydrogenase | E1J06_20555 | Not Available | + | 4839948 - 4841288 | 47693.8 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | E1J06_20560 | Not Available | + | 4841288 - 4842688 | 52348.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E1J06_20565 | Not Available | + | 4842859 - 4843701 | 31652.6 |
| gluconate 5-dehydrogenase | E1J06_20570 | Not Available | + | 4843738 - 4844541 | 28590.5 |
| duf4861 domain-containing protein | E1J06_20575 | Not Available | + | 4844638 - 4845810 | 42934.5 |
| tonb-dependent receptor | E1J06_20580 | Not Available | + | 4845987 - 4849025 | 111931.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20585 | Not Available | + | 4849032 - 4850555 | 57193.0 |
| beta-glucosidase bglx | E1J06_20590 | Not Available | + | 4850637 - 4852952 | 84687.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
