Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4884 domain-containing protein | E1J06_20430 | Not Available | - | 4800197 - 4800466 | 10141.0 |
| rubrerythrin family protein | E1J06_20435 | Not Available | + | 4800648 - 4801226 | 21626.4 |
| hybrid sensor histidine kinase/response regulator | E1J06_20440 | Not Available | - | 4801320 - 4805306 | 150428.0 |
| hypothetical protein | E1J06_20445 | Not Available | - | 4805407 - 4806747 | 51317.7 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20450 | Not Available | - | 4806828 - 4808600 | 67490.8 |
| tonb-dependent receptor | E1J06_20455 | Not Available | - | 4808625 - 4811789 | 116646.0 |
| glycoside hydrolase family 127 protein | E1J06_20460 | Not Available | - | 4811820 - 4814255 | 91231.8 |
| master dna invertase mpi family serine-type recombinase | E1J06_20465 | Not Available | + | 4814633 - 4815244 | 23046.3 |
| hypothetical protein | E1J06_20480 | Not Available | - | 4816285 - 4816530 | 9332.0 |
| tonb-dependent receptor | E1J06_20490 | Not Available | + | 4817152 - 4820187 | 112921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
