Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | E1J06_20330 | Not Available | + | 4775383 - 4778217 | 108420.0 |
| yitt family protein | E1J06_20335 | Not Available | + | 4778300 - 4779196 | 33128.3 |
| n-acetyltransferase | E1J06_20340 | Not Available | - | 4779301 - 4779828 | 20768.9 |
| non-canonical purine ntp diphosphatase | E1J06_20345 | Not Available | + | 4779988 - 4780569 | 21253.5 |
| quinolinate synthase nada | E1J06_20350 | Not Available | - | 4780853 - 4781845 | 36614.1 |
| trmh family rna methyltransferase | E1J06_20355 | Not Available | + | 4782428 - 4782964 | 19975.2 |
| duf4294 domain-containing protein | E1J06_20360 | Not Available | - | 4782995 - 4783567 | 22064.0 |
| helix-hairpin-helix domain-containing protein | E1J06_20365 | Not Available | + | 4783664 - 4785736 | 81316.2 |
| radical sam protein | E1J06_20370 | Not Available | + | 4785782 - 4786558 | 29199.2 |
| response regulator transcription factor | E1J06_20375 | Not Available | - | 4786630 - 4787328 | 26746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
