Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_20270 | Not Available | - | 4751665 - 4752207 | 21245.2 |
| site-specific integrase | E1J06_20275 | Not Available | - | 4752192 - 4753427 | 47347.5 |
| susc/raga family tonb-linked outer membrane protein | E1J06_20285 | Not Available | - | 4754807 - 4758334 | 131593.0 |
| fecr family protein | E1J06_20290 | Not Available | - | 4758399 - 4759409 | 38678.5 |
| rna polymerase sigma-70 factor | E1J06_20295 | Not Available | - | 4759498 - 4760085 | 22777.2 |
| protease | E1J06_20300 | Not Available | + | 4760264 - 4763488 | 120832.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20305 | Not Available | - | 4763551 - 4765332 | 68817.7 |
| duf4982 domain-containing protein | E1J06_20315 | Not Available | - | 4768424 - 4770862 | 92814.9 |
| hybrid sensor histidine kinase/response regulator | E1J06_20320 | Not Available | - | 4771005 - 4774988 | 152726.0 |
| hypothetical protein | E1J06_20325 | Not Available | - | 4775187 - 4775384 | 8055.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
