Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_20205 | Not Available | - | 4739454 - 4739786 | 12719.2 |
| dna-binding protein | E1J06_20210 | Not Available | + | 4739942 - 4740253 | 12118.7 |
| dna-binding protein | E1J06_20215 | Not Available | + | 4740296 - 4740619 | 12529.9 |
| hypothetical protein | E1J06_20225 | Not Available | - | 4742595 - 4743071 | 17348.6 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_20230 | Not Available | - | 4743090 - 4745033 | 72727.1 |
| tonb-dependent receptor | E1J06_20235 | Not Available | - | 4745042 - 4748164 | 115583.0 |
| hypothetical protein | E1J06_20240 | Not Available | - | 4748786 - 4748980 | 7400.14 |
| sigma-70 family rna polymerase sigma factor | E1J06_20250 | Not Available | - | 4749636 - 4750196 | 22170.5 |
| hypothetical protein | E1J06_20255 | Not Available | + | 4750221 - 4750412 | 7337.9 |
| kila-n domain-containing protein | E1J06_20265 | Not Available | - | 4750895 - 4751698 | 30740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
