Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | E1J06_19925 | Not Available | - | 4690415 - 4691122 | 26634.2 |
| undecaprenyl-diphosphate phosphatase | E1J06_19930 | Not Available | - | 4691127 - 4691927 | 28538.1 |
| duf3098 domain-containing protein | E1J06_19935 | Not Available | - | 4691965 - 4692210 | 9145.44 |
| abc transporter permease | E1J06_19940 | Not Available | - | 4692223 - 4693092 | 32622.6 |
| class i sam-dependent methyltransferase | E1J06_19945 | Not Available | - | 4693095 - 4693961 | 33298.9 |
| pspc domain-containing protein | E1J06_19950 | Not Available | + | 4694129 - 4694365 | 9169.21 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E1J06_19955 | Not Available | - | 4694375 - 4694776 | 15053.2 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | E1J06_19960 | Not Available | - | 4694776 - 4696146 | 51892.9 |
| hypothetical protein | E1J06_19965 | Not Available | + | 4696484 - 4696834 | 13263.3 |
| acetyl-coa hydrolase/transferase family protein | E1J06_19970 | Not Available | + | 4696873 - 4698366 | 53970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
