Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | E1J06_19825 | Not Available | - | 4665788 - 4666375 | 21627.4 |
| methionine adenosyltransferase | E1J06_19830 | Not Available | - | 4666490 - 4667782 | 47641.8 |
| mfs transporter | E1J06_19835 | Not Available | + | 4668060 - 4669436 | 49145.7 |
| multidrug dmt transporter permease | E1J06_19840 | Not Available | - | 4669527 - 4670528 | 35899.6 |
| adp-ribosylglycohydrolase family protein | E1J06_19845 | Not Available | - | 4670565 - 4672118 | 58214.1 |
| ribokinase | E1J06_19850 | Not Available | - | 4672127 - 4673050 | 32848.7 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_19855 | Not Available | - | 4673065 - 4674582 | 58583.0 |
| tonb-dependent receptor | E1J06_19860 | Not Available | - | 4674616 - 4677630 | 112209.0 |
| hypothetical protein | E1J06_19865 | Not Available | + | 4678116 - 4679648 | 60430.7 |
| metallophosphoesterase | E1J06_19870 | Not Available | + | 4679751 - 4680494 | 27699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
