Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3868 domain-containing protein | E1J06_19775 | Not Available | - | 4655269 - 4656687 | 53203.6 |
| duf3575 domain-containing protein | E1J06_19780 | Not Available | - | 4656700 - 4657287 | 21906.1 |
| Trna-gln | Not Available | Not Available | + | 4657942 - 4658015 | Not Available |
| peptidase s41 | E1J06_19790 | Not Available | + | 4658150 - 4661404 | 121900.0 |
| tyrosine--trna ligase | E1J06_19795 | Not Available | - | 4661497 - 4662789 | 48040.6 |
| hydrolase tatd | E1J06_19800 | Not Available | - | 4662868 - 4663497 | 23775.8 |
| membrane protein insertion efficiency factor yidd | E1J06_19805 | Not Available | - | 4663512 - 4663733 | 8364.46 |
| ribonuclease p protein component | E1J06_19810 | Not Available | - | 4663730 - 4664122 | 15184.9 |
| uroporphyrinogen-iii synthase | E1J06_19815 | Not Available | - | 4664225 - 4664974 | 28619.6 |
| duf4271 domain-containing protein | E1J06_19820 | Not Available | - | 4664979 - 4665791 | 31612.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
