Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | E1J06_19570 | Not Available | - | 4603764 - 4604258 | 19218.4 |
| site-specific integrase | E1J06_19575 | Not Available | - | 4605067 - 4606005 | 36144.6 |
| murein l,d-transpeptidase | E1J06_19580 | Not Available | + | 4606213 - 4607232 | 38879.8 |
| murein l,d-transpeptidase catalytic domain family protein | E1J06_19585 | Not Available | + | 4607235 - 4608032 | 29163.1 |
| hypothetical protein | E1J06_19595 | Not Available | + | 4609395 - 4610627 | 44218.3 |
| hamp domain-containing histidine kinase | E1J06_19600 | Not Available | - | 4610613 - 4611965 | 51795.6 |
| response regulator transcription factor | E1J06_19605 | Not Available | - | 4612010 - 4612684 | 25755.4 |
| efflux rnd transporter permease subunit | E1J06_19610 | Not Available | - | 4612724 - 4615849 | 115189.0 |
| efflux rnd transporter periplasmic adaptor subunit | E1J06_19615 | Not Available | - | 4615859 - 4616956 | 40640.4 |
| tolc family protein | E1J06_19620 | Not Available | - | 4616981 - 4618234 | 48002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
