Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J06_18950 | Not Available | + | 4444770 - 4445165 | 15138.7 |
| susc/raga family tonb-linked outer membrane protein | E1J06_18990 | Not Available | + | 4459030 - 4462440 | 124833.0 |
| susc/raga family tonb-linked outer membrane protein | E1J06_19000 | Not Available | + | 4464817 - 4467972 | 114933.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_19005 | Not Available | + | 4467993 - 4469963 | 74039.3 |
| hypothetical protein | E1J06_19010 | Not Available | - | 4470275 - 4470739 | 17313.7 |
| acetyl-coa synthetase | E1J06_19015 | Not Available | - | 4470784 - 4472436 | 62328.4 |
| cupin domain-containing protein | E1J06_19020 | Not Available | - | 4472521 - 4473075 | 20504.8 |
| pyridoxamine 5'-phosphate oxidase family protein | E1J06_19025 | Not Available | + | 4473322 - 4473813 | 18963.9 |
| duf1893 domain-containing protein | E1J06_19030 | Not Available | - | 4474074 - 4474490 | 15826.4 |
| 4fe-4s dicluster domain-containing protein | E1J06_19035 | Not Available | - | 4474503 - 4476029 | 55792.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
