Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E1J06_18880 | Not Available | - | 4417987 - 4421187 | 118397.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_18885 | Not Available | - | 4421678 - 4423564 | 72152.2 |
| susc/raga family tonb-linked outer membrane protein | E1J06_18890 | Not Available | - | 4423592 - 4427002 | 124833.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_18905 | Not Available | - | 4428387 - 4430342 | 73688.4 |
| aaa family atpase | E1J06_18915 | Not Available | - | 4433727 - 4434920 | 45823.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J06_18920 | Not Available | - | 4435247 - 4437106 | 70276.5 |
| susc/raga family tonb-linked outer membrane protein | E1J06_18925 | Not Available | - | 4437142 - 4440534 | 124324.0 |
| virulence-associated protein e | E1J06_18930 | Not Available | - | 4440870 - 4442021 | 45217.5 |
| hypothetical protein | E1J06_18935 | Not Available | - | 4442126 - 4442332 | 7990.83 |
| dna-binding protein | E1J06_18940 | Not Available | + | 4442334 - 4442972 | 24248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
