Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylanase | E1J06_18780 | Not Available | + | 4388663 - 4390048 | 51212.6 |
| hybrid sensor histidine kinase/response regulator | E1J06_18785 | Not Available | + | 4390181 - 4394113 | 149329.0 |
| rna-binding protein | E1J06_18790 | Not Available | + | 4394379 - 4394624 | 9129.97 |
| threonine/serine exporter family protein | E1J06_18795 | Not Available | - | 4394729 - 4396075 | 50203.2 |
| pasta domain-containing protein | E1J06_18800 | Not Available | + | 4396225 - 4396866 | 23480.0 |
| rlua family pseudouridine synthase | E1J06_18805 | Not Available | + | 4396885 - 4397958 | 40888.8 |
| d-alanine--d-alanine ligase | E1J06_18810 | Not Available | + | 4397955 - 4398929 | 36103.2 |
| acyltransferase | E1J06_18815 | Not Available | + | 4399033 - 4400190 | 44600.7 |
| hypothetical protein | E1J06_18820 | Not Available | + | 4400249 - 4400899 | 24839.7 |
| rhodanese-like domain-containing protein | E1J06_18825 | Not Available | + | 4400929 - 4401327 | 15093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
