Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helicase | E1J06_18580 | Not Available | + | 4321218 - 4323731 | 97122.1 |
| tonb-dependent receptor | E1J06_18585 | Not Available | + | 4324246 - 4327317 | 113226.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_18590 | Not Available | + | 4327330 - 4328883 | 58367.6 |
| glycoside hydrolase | E1J06_18595 | Not Available | - | 4329000 - 4330001 | 37807.4 |
| beta-glucanase | E1J06_18600 | Not Available | - | 4330327 - 4331469 | 42625.3 |
| beta-xylosidase | E1J06_18605 | Not Available | - | 4331495 - 4333951 | 94029.7 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_18610 | Not Available | - | 4334231 - 4335922 | 62940.1 |
| tonb-dependent receptor | E1J06_18615 | Not Available | - | 4335936 - 4339037 | 114602.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_18620 | Not Available | - | 4339439 - 4341463 | 76829.5 |
| tonb-dependent receptor | E1J06_18625 | Not Available | - | 4341479 - 4344787 | 123703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
