Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | E1J06_18430 | Not Available | - | 4277805 - 4278698 | 31636.8 |
| biopolymer transporter exbd | E1J06_18435 | Not Available | - | 4278708 - 4279127 | 16051.8 |
| mota/tolq/exbb proton channel family protein | E1J06_18440 | Not Available | - | 4279134 - 4279847 | 25641.7 |
| pyridoxine 5'-phosphate synthase | E1J06_18445 | Not Available | - | 4279847 - 4280563 | 26387.6 |
| nad kinase | E1J06_18450 | Not Available | + | 4280682 - 4281554 | 32170.4 |
| acyloxyacyl hydrolase | E1J06_18455 | Not Available | + | 4281726 - 4283036 | 49791.6 |
| hypothetical protein | E1J06_18460 | Not Available | - | 4283570 - 4283737 | 6430.67 |
| is66-like element isbf10 family transposase | E1J06_18465 | Not Available | - | 4283813 - 4285486 | 65055.0 |
| transposase | E1J06_18470 | Not Available | - | 4285562 - 4285927 | 14239.3 |
| is66 family insertion sequence hypothetical protein | E1J06_18475 | Not Available | - | 4285931 - 4286287 | 13413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
