Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | E1J06_18375 | Not Available | + | 4265837 - 4266838 | 36008.4 |
| dna primase | E1J06_18380 | Not Available | + | 4266916 - 4268991 | 78739.4 |
| gtp cyclohydrolase i fole | E1J06_18385 | Not Available | - | 4269007 - 4269600 | 22694.7 |
| spor domain-containing protein | E1J06_18390 | Not Available | - | 4269605 - 4270063 | 17078.7 |
| duf1599 domain-containing protein | E1J06_18400 | Not Available | - | 4272246 - 4272788 | 20792.1 |
| lysm peptidoglycan-binding domain-containing protein | E1J06_18405 | Not Available | - | 4272902 - 4273789 | 33176.0 |
| nucleoside-diphosphate kinase | E1J06_18410 | Not Available | - | 4273810 - 4274274 | 17375.1 |
| atp-dependent dna helicase recg | E1J06_18415 | Not Available | - | 4274496 - 4276592 | 79842.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | E1J06_18420 | Not Available | - | 4276594 - 4277253 | 24356.5 |
| dj-1/pfpi family protein | E1J06_18425 | Not Available | - | 4277250 - 4277801 | 19240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
