Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | E1J06_18270 | Not Available | - | 4248213 - 4248884 | 24894.8 |
| trigger factor | E1J06_18275 | Not Available | - | 4249065 - 4250420 | 51399.6 |
| rna-binding protein | E1J06_18280 | Not Available | + | 4250803 - 4251048 | 9049.81 |
| lps export abc transporter atp-binding protein | E1J06_18285 | Not Available | - | 4251121 - 4251942 | 31076.3 |
| abc transporter permease | E1J06_18290 | Not Available | + | 4252071 - 4252814 | 27432.5 |
| abc transporter atp-binding protein | E1J06_18295 | Not Available | + | 4252811 - 4253575 | 28957.0 |
| ribosome biogenesis gtpase der | E1J06_18300 | Not Available | - | 4253658 - 4254971 | 49372.4 |
| gtpase era | E1J06_18305 | Not Available | - | 4255006 - 4255887 | 33710.8 |
| ketoacyl-acp synthase iii | E1J06_18310 | Not Available | - | 4255970 - 4256974 | 36862.4 |
| 50s ribosomal protein l32 | E1J06_18315 | Not Available | - | 4257079 - 4257264 | 6838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
