Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | E1J06_18070 | Not Available | - | 4194479 - 4195150 | 25443.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | E1J06_18075 | Not Available | - | 4195152 - 4195898 | 25964.4 |
| tetr/acrr family transcriptional regulator | E1J06_18080 | Not Available | - | 4195930 - 4196529 | 22662.3 |
| Trna-met | Not Available | Not Available | + | 4196761 - 4196833 | Not Available |
| glycoside hydrolase family 2 protein | E1J06_18090 | Not Available | + | 4196936 - 4199614 | 101380.0 |
| duf1566 domain-containing protein | E1J06_18095 | Not Available | + | 4199840 - 4201390 | 55165.7 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_18100 | Not Available | - | 4201856 - 4203871 | 75955.4 |
| tonb-dependent receptor | E1J06_18105 | Not Available | - | 4203892 - 4207128 | 120095.0 |
| dead/deah box helicase | E1J06_18110 | Not Available | - | 4207793 - 4209097 | 48264.6 |
| hypothetical protein | E1J06_18115 | Not Available | - | 4209299 - 4211755 | 89657.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
