Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | E1J06_17955 | Not Available | - | 4163917 - 4167186 | 122304.0 |
| duf4974 domain-containing protein | E1J06_17960 | Not Available | - | 4167215 - 4168201 | 38555.0 |
| rna polymerase sigma-70 factor | E1J06_17965 | Not Available | - | 4168266 - 4168868 | 23564.7 |
| glycoside hydrolase family 37 | E1J06_17970 | Not Available | - | 4168871 - 4170253 | 53163.9 |
| zinc metallopeptidase | E1J06_17975 | Not Available | - | 4170413 - 4171093 | 24715.3 |
| arac family transcriptional regulator | E1J06_17980 | Not Available | + | 4171305 - 4172207 | 35296.9 |
| nucleotidyltransferase | E1J06_17985 | Not Available | - | 4172312 - 4173223 | 33778.1 |
| hypothetical protein | E1J06_17990 | Not Available | - | 4173358 - 4175715 | 88916.5 |
| hypothetical protein | E1J06_17995 | Not Available | - | 4175712 - 4180370 | 172283.0 |
| hypothetical protein | E1J06_18000 | Not Available | + | 4180591 - 4181079 | 18837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
