Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | E1J06_17905 | Not Available | - | 4148304 - 4149320 | 36169.0 |
| fucose isomerase | E1J06_17910 | Not Available | - | 4149333 - 4150757 | 52343.9 |
| glycerol kinase | E1J06_17915 | Not Available | - | 4150791 - 4152287 | 55247.5 |
| transketolase family protein | E1J06_17920 | Not Available | - | 4152313 - 4153251 | 33656.6 |
| transketolase | E1J06_17925 | Not Available | - | 4153241 - 4154086 | 31441.6 |
| deor/glpr transcriptional regulator | E1J06_17930 | Not Available | - | 4154429 - 4155184 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | E1J06_17935 | Not Available | - | 4155196 - 4155810 | 22170.7 |
| duf5060 domain-containing protein | E1J06_17940 | Not Available | - | 4155932 - 4157536 | 62019.9 |
| hybrid sensor histidine kinase/response regulator | E1J06_17945 | Not Available | - | 4157701 - 4162023 | 164882.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J06_17950 | Not Available | - | 4162200 - 4163897 | 64615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
