Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | E1J06_17855 | Not Available | - | 4137215 - 4137505 | 11001.3 |
| type i-c crispr-associated endonuclease cas1 | E1J06_17860 | Not Available | - | 4137515 - 4138537 | 38736.4 |
| crispr-associated protein cas4 | E1J06_17865 | Not Available | - | 4138534 - 4139199 | 25764.9 |
| type i-c crispr-associated protein cas7/csd2 | E1J06_17870 | Not Available | - | 4139209 - 4140060 | 31386.5 |
| type i-c crispr-associated protein cas8c/csd1 | E1J06_17875 | Not Available | - | 4140082 - 4141803 | 65427.8 |
| type i-c crispr-associated protein cas5 | E1J06_17880 | Not Available | - | 4141800 - 4142492 | 27232.7 |
| hypothetical protein | E1J06_17885 | Not Available | - | 4142494 - 4143354 | 33184.4 |
| crispr-associated helicase/endonuclease cas3 | E1J06_17890 | Not Available | - | 4143365 - 4145590 | 84397.2 |
| histidine--trna ligase | E1J06_17895 | Not Available | - | 4145923 - 4147287 | 50331.8 |
| sugar abc transporter substrate-binding protein | E1J06_17900 | Not Available | - | 4147448 - 4148296 | 31200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
