Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is4/is5 family transposase | DWW04_08805 | Not Available | - | 2141243 - 2141677 | 16909.2 |
| duf4372 domain-containing protein | DWW04_08810 | Not Available | - | 2141680 - 2141832 | 5854.13 |
| hypothetical protein | DWW04_08815 | Not Available | - | 2141909 - 2143504 | 62635.9 |
| alpha-amylase | DWW04_08820 | Not Available | + | 2143753 - 2145603 | 70753.0 |
| glycoside hydrolase family 97 protein | DWW04_08825 | Not Available | + | 2145645 - 2147861 | 84335.1 |
| tonb-dependent receptor | DWW04_08830 | Not Available | + | 2147947 - 2150952 | 111084.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_08835 | Not Available | + | 2150965 - 2152572 | 60468.7 |
| hypothetical protein | DWW04_08840 | Not Available | + | 2152590 - 2153696 | 40893.6 |
| tonb-dependent receptor | DWW04_08845 | Not Available | + | 2154387 - 2157467 | 113481.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_08850 | Not Available | + | 2157479 - 2159101 | 59857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
