Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | DWW04_08250 | Not Available | - | 2013723 - 2015018 | 49643.3 |
| Trna-lys | Not Available | Not Available | + | 2016091 - 2016166 | Not Available |
| ai-2e family transporter | DWW04_08265 | Not Available | - | 2016258 - 2017394 | 42807.2 |
| thymidine kinase | DWW04_08270 | Not Available | - | 2017405 - 2018004 | 22348.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DWW04_08275 | Not Available | + | 2018210 - 2018884 | 25002.3 |
| hypothetical protein | DWW04_08280 | Not Available | + | 2018913 - 2019761 | 31531.5 |
| noncanonical pyrimidine nucleotidase, yjjg family | DWW04_08285 | Not Available | + | 2019838 - 2020527 | 26986.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_08290 | Not Available | - | 2020710 - 2022251 | 57972.3 |
| tonb-dependent receptor | DWW04_08295 | Not Available | - | 2022354 - 2025374 | 111247.0 |
| site-specific integrase | DWW04_08300 | Not Available | + | 2025758 - 2026918 | 44985.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
